Title
Sequencing and exploitation of the Brassica A genome

CoPED ID
d5bb1600-eab8-4511-9914-4e901ceeb996

Status
Closed

Funder

Value
£63,291

Start Date
July 1, 2007

End Date
Nov. 2, 2010

Description

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Brassica crops are major contributors to healthy human diet and agricultural economies worldwide. They include oil crops such as oilseed rape (B. napus) and vegetables such as cabbage, cauliflower, broccoli (B. oleracea) and Chinese cabbage and turnip (B. rapa). The UK provides 5% of worldwide production of rapeseed, the oil from which has important nutritional properties and has potential as a biofuel or a renewable resource for industrial applications. Brassica vegetables are rich sources of vitamins, minerals and compounds that help protect against cancer.

A worldwide consortium has initiated the Brassica rapa Genome Sequencing Project, with ongoing activity in Korea, Australia, Germany, Canada, USA and elsewhere. A consortium comprising scientists drawn from three UK institutions with major programmes in Brassica research, together with the Beijing Genomics Institute and Huazhong Agricultural University in China, and the Institute for Genomics Research in the USA will work together to:(1) Advance the multinational Brassica rapa Genome Sequencing Project (BrGSP) by sequencing ca. 700 overlapping BAC clones representing the gene space of chromosomes R1 and R8. (2) Enable transitions to the oilseed rape genome by end sequencing 73,728 Brassica napus BAC clones. (3) Rapidly deliver into the public domain the sequences generated by the consortium, retaining no IP. (4) Rapidly deliver into the public domain an automated annotation of all sequences produced worldwide within the BrGSP. (5) Establish bioinformatic resources to provide added value to UK Brassica research and stakeholder communities, including a database system with displays tailored to enhance the ability of the various user communities to exploit the sequence data for research and the improvement of the Brassica crops of importance in the UK. (6) Analyse the sequence data generated to identify and characterise the novel features of hexaploid genome structure and evolution.

Graham King PI_PER

Subjects by relevance
  1. Brassica
  2. Genes
  3. Rapeseed
  4. Genome
  5. Oil plants
  6. Biotechnology
  7. Plant breeding
  8. Cultivated plants
  9. Gene technology
  10. Chromosomes
  11. Cloning
  12. Vegetable oils
  13. Genomics
  14. Sequencing
  15. Cauliflower
  16. Turnip rape oil
  17. Turnip rape

Extracted key phrases
  1. UK Brassica research
  2. Brassica napus BAC clone
  3. Brassica crop
  4. Multinational Brassica
  5. Oilseed rape genome
  6. Sequencing
  7. Oil crop
  8. Worldwide consortium
  9. Sequence datum
  10. Hexaploid genome structure
  11. B. rapa
  12. Healthy human diet
  13. B. napus
  14. Major contributor
  15. Worldwide production

Related Pages

UKRI project entry

UK Project Locations