Label-free nanopore sensing of single actin dynamics and drug binding in real-time

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Title
Label-free nanopore sensing of single actin dynamics and drug binding in real-time

CoPED ID
41b4732e-ac26-4f27-9081-b2018e0c9d9c

Status
Active

Funders

Value
No funds listed.

Start Date
Sept. 30, 2019

End Date
Sept. 29, 2022

Description

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Actin is a key protein at the heart of dynamic processes within the eukaryotic cell. To date, methods exploring the molecular state of actin have been limited to insights gained from structural approaches, which provide only a snapshot of protein folding, or solution-based single-molecule methods that require chemical modifications compromising actin monomer thermostability. In recent years, the development of nanopore sensing has permitted investigation of native proteins. This label-free method is ideally suited to study proteins such as actin that require specialised buffers and cofactors. This project is based around the use of solid-state nanopores, to determine the state of actin at the macromolecular level (filamentous or globular) and in its monomeric form bound to inhibitors. We will use the technology to access urea-dependent and voltage-dependent transitional states and, critically, we to observe an unfolding process within which sub-populations of transient actin oligomers. Furthermore, we plan to use drug-binding or filament-growth events in real-time to calculate stoichiometries and thus propose a model for protein dynamics using unmodified, native actin molecules. This dynamic readout of actin in solution demonstrates the power of nanopipettes for future applications such as gaining a more in-depth understanding of protein folding landscapes and for drug discovery.

Joshua Edel SUPER_PER
Xiaoyi Wang STUDENT_PER

Subjects by relevance
  1. Proteins
  2. Actins
  3. Dynamics

Extracted key phrases
  1. Single actin dynamic
  2. Native actin molecule
  3. Free nanopore sensing
  4. Protein dynamic
  5. Actin monomer thermostability
  6. Native protein
  7. Protein folding landscape
  8. State nanopore
  9. Key protein
  10. Label
  11. Free method
  12. Dependent transitional state
  13. Molecule method
  14. Dynamic readout
  15. Molecular state

Related Pages

UKRI project entry

UK Project Locations